Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AP005901.3-202ENST00000581653 237 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AC079602.3-201ENST00000623931 403 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 AC112497.1-201ENST00000624824 639 ntBASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 RPSAP43-201ENST00000402237 625 ntBASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 AC091607.1-201ENST00000490318 1060 ntBASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 MIR3917-201ENST00000580971 93 ntBASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC168Q8NDH2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 CYMP-203ENST00000474680 1263 ntBASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 AC145285.3-201ENST00000564603 959 ntBASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 IGHV3-22-201ENST00000520721 359 ntBASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC168Q8NDH2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AC083906.6-201ENST00000641366 219 ntBASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AC079781.4-201ENST00000641908 219 ntBASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC168Q8NDH2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms