Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC011498.5-201ENST00000592027 486 ntBASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 AC104417.2-201ENST00000562989 1793 ntBASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEFF1Q8IYR6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 AL845331.1-201ENST00000424978 1190 ntBASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEFF1Q8IYR6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 AC016734.2-201ENST00000624325 1377 ntBASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 AL121672.3-201ENST00000608644 468 ntBASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEFF1Q8IYR6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 AC036111.1-201ENST00000533973 1582 ntBASIC18.85■□□□□ 0.61
TMEFF1Q8IYR6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 MIR3180-1-201ENST00000580374 94 ntBASIC18.84■□□□□ 0.61
TMEFF1Q8IYR6 MIR3180-3-201ENST00000584616 94 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms