Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 GUSBP5-201ENST00000418136 578 ntBASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.22■□□□□ 0.35
CROCCP3Q8IVE0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 AC141586.3-201ENST00000562166 1838 ntBASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 AC010141.2-201ENST00000452426 721 ntBASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 AC243732.1-201ENST00000612648 864 ntBASIC17.21■□□□□ 0.35
CROCCP3Q8IVE0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CROCCP3Q8IVE0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 AC091799.1-201ENST00000422823 811 ntBASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 AC097381.1-201ENST00000429019 1296 ntBASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 AC079140.4-201ENST00000507448 529 ntBASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 AL355001.2-201ENST00000620617 1191 ntBASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CROCCP3Q8IVE0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms