Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 RPS2P52-201ENST00000469610 820 ntBASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 AC083906.6-201ENST00000641366 219 ntBASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 AC068880.1-201ENST00000507289 2297 ntBASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 AC133552.2-202ENST00000575694 574 ntBASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 AC006557.6-201ENST00000623071 864 ntBASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD3Q8IVD9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD3Q8IVD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 MKRN4P-201ENST00000444706 1521 ntBASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 ABALON-201ENST00000629058 1903 ntBASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms