Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL23A1Q86Y22 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 FAM197Y8-203ENST00000450145 560 ntBASIC23.86■■□□□ 1.41
COL23A1Q86Y22 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 AC148477.8-201ENST00000624298 468 ntBASIC23.86■■□□□ 1.41
COL23A1Q86Y22 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL23A1Q86Y22 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 AL031284.1-201ENST00000419297 478 ntBASIC23.85■■□□□ 1.41
COL23A1Q86Y22 AC106730.1-201ENST00000566722 1090 ntBASIC23.85■■□□□ 1.41
COL23A1Q86Y22 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.85■■□□□ 1.41
COL23A1Q86Y22 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.85■■□□□ 1.41
COL23A1Q86Y22 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL23A1Q86Y22 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 FAM220CP-201ENST00000395253 831 ntBASIC23.84■■□□□ 1.41
COL23A1Q86Y22 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 AP005901.3-202ENST00000581653 237 ntBASIC23.84■■□□□ 1.41
COL23A1Q86Y22 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 NSUN5P1-202ENST00000421140 1535 ntBASIC23.84■■□□□ 1.41
COL23A1Q86Y22 NSUN5P2-203ENST00000457352 1529 ntBASIC23.84■■□□□ 1.41
COL23A1Q86Y22 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
COL23A1Q86Y22 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 AC091607.1-201ENST00000490318 1060 ntBASIC23.83■■□□□ 1.41
COL23A1Q86Y22 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.83■■□□□ 1.41
COL23A1Q86Y22 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.83■■□□□ 1.4
COL23A1Q86Y22 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL23A1Q86Y22 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 NUS1P2-201ENST00000417358 873 ntBASIC23.82■■□□□ 1.4
COL23A1Q86Y22 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 AL592071.1-201ENST00000611956 408 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms