Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
VRK2Q86Y07 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK2Q86Y07 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VRK2Q86Y07 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK2Q86Y07 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 Z98044.1-201ENST00000632503 1764 ntBASIC17.56■□□□□ 0.4
VRK2Q86Y07 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 Z85996.1-201ENST00000494644 937 ntBASIC17.56■□□□□ 0.4
VRK2Q86Y07 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 WIZP1-201ENST00000531444 2299 ntBASIC17.56■□□□□ 0.4
VRK2Q86Y07 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VRK2Q86Y07 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK2Q86Y07 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 C1QBPP2-201ENST00000528754 825 ntBASIC17.55■□□□□ 0.4
VRK2Q86Y07 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK2Q86Y07 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms