Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 AC092329.2-201ENST00000598402 547 ntBASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 TEX21P-204ENST00000641479 1693 ntBASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4RL1Q86UN2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 AL162741.1-201ENST00000565563 1558 ntBASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 AC112497.1-201ENST00000624824 639 ntBASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4RL1Q86UN2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 MIR3917-201ENST00000580971 93 ntBASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 AL121672.3-201ENST00000608644 468 ntBASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 Z82202.1-201ENST00000623446 1880 ntBASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4RL1Q86UN2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 AL391807.1-203ENST00000604392 2365 ntBASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 BX276092.5-203ENST00000456199 560 ntBASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4RL1Q86UN2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 MIR662-201ENST00000384847 95 ntBASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 MIR3652-201ENST00000579335 131 ntBASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN4RL1Q86UN2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms