Protein–RNA interactions for Protein: Q6UWJ1

TMCO3, Transmembrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3Q6UWJ1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 AC139713.2-201ENST00000641328 2723 ntBASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 AC073210.2-201ENST00000430369 194 ntBASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 AC142086.2-201ENST00000569753 217 ntBASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 MYC-209ENST00000641252 345 ntBASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 AC133041.1-202ENST00000642053 222 ntBASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMCO3Q6UWJ1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMCO3Q6UWJ1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ID1-201ENST00000376105 1233 ntBASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 AC069152.1-201ENST00000438030 544 ntBASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TMCO3Q6UWJ1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 AL355802.2-201ENST00000402069 882 ntBASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 AL031598.1-201ENST00000561511 1773 ntBASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMCO3Q6UWJ1 AC067852.2-201ENST00000590513 2313 ntBASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMCO3Q6UWJ1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.54■□□□□ 0.88
TMCO3Q6UWJ1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms