Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 AJ011932.1-201ENST00000621707 465 ntBASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL13A1Q5TAT6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
COL13A1Q5TAT6 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
COL13A1Q5TAT6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 AC004449.1-201ENST00000564240 433 ntBASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 AC064836.3-201ENST00000607928 673 ntBASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 AL162377.1-201ENST00000618844 1793 ntBASIC21.38■■□□□ 1.01
COL13A1Q5TAT6 HEIH-201ENST00000623091 1652 ntBASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 AC009947.1-201ENST00000444350 727 ntBASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 GPAT2P1-201ENST00000444924 1672 ntBASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL13A1Q5TAT6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 C20orf181-201ENST00000623918 480 ntBASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL13A1Q5TAT6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 AC008735.5-201ENST00000623544 497 ntBASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.35■■□□□ 1.01
COL13A1Q5TAT6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms