Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB6CQ53S08 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB6CQ53S08 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB6CQ53S08 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB6CQ53S08 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RAB6CQ53S08 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RAB6CQ53S08 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.76■□□□□ 0.75
RAB6CQ53S08 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 MFAP1P1-201ENST00000442257 1255 ntBASIC19.76■□□□□ 0.75
RAB6CQ53S08 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 PRSS44-201ENST00000515154 1146 ntBASIC19.76■□□□□ 0.75
RAB6CQ53S08 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB6CQ53S08 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB6CQ53S08 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 AC096733.2-201ENST00000609937 1394 ntBASIC19.75■□□□□ 0.75
RAB6CQ53S08 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 CRYGFP-201ENST00000418459 633 ntBASIC19.75■□□□□ 0.75
RAB6CQ53S08 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 MIR4785-201ENST00000585005 73 ntBASIC19.75■□□□□ 0.75
RAB6CQ53S08 AC008622.2-201ENST00000617006 1229 ntBASIC19.75■□□□□ 0.75
RAB6CQ53S08 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB6CQ53S08 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RAB6CQ53S08 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB6CQ53S08 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB6CQ53S08 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms