Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3S2P59780 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.33■□□□□ 0.2
AP3S2P59780 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.33■□□□□ 0.2
AP3S2P59780 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
AP3S2P59780 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
AP3S2P59780 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP3S2P59780 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3S2P59780 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S2P59780 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
AP3S2P59780 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S2P59780 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.32■□□□□ 0.2
AP3S2P59780 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
AP3S2P59780 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 MFSD11-216ENST00000590393 1141 ntBASIC16.32■□□□□ 0.2
AP3S2P59780 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP3S2P59780 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S2P59780 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
AP3S2P59780 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.31■□□□□ 0.2
AP3S2P59780 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 AC018553.1-201ENST00000616682 1458 ntBASIC16.31■□□□□ 0.2
AP3S2P59780 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3S2P59780 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.31■□□□□ 0.2
AP3S2P59780 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 AC023632.3-201ENST00000521633 145 ntBASIC16.31■□□□□ 0.2
AP3S2P59780 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3S2P59780 AL591742.1-201ENST00000604433 565 ntBASIC16.31■□□□□ 0.2
AP3S2P59780 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3S2P59780 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 AC139713.2-201ENST00000641328 2723 ntBASIC16.31■□□□□ 0.2
AP3S2P59780 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S2P59780 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S2P59780 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP3S2P59780 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S2P59780 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S2P59780 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms