Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
SMIM11AP58511 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.53■□□□□ 0.4
SMIM11AP58511 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SMIM11AP58511 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMIM11AP58511 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMIM11AP58511 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.52■□□□□ 0.4
SMIM11AP58511 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.52■□□□□ 0.4
SMIM11AP58511 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.52■□□□□ 0.4
SMIM11AP58511 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.52■□□□□ 0.4
SMIM11AP58511 AC097658.1-201ENST00000475555 843 ntBASIC17.52■□□□□ 0.4
SMIM11AP58511 AC083906.2-201ENST00000511578 360 ntBASIC17.52■□□□□ 0.4
SMIM11AP58511 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.52■□□□□ 0.4
SMIM11AP58511 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.52■□□□□ 0.4
SMIM11AP58511 MIR4758-201ENST00000577688 71 ntBASIC17.52■□□□□ 0.4
SMIM11AP58511 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM11AP58511 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.39
SMIM11AP58511 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
SMIM11AP58511 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.52■□□□□ 0.39
SMIM11AP58511 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.52■□□□□ 0.39
SMIM11AP58511 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SMIM11AP58511 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SMIM11AP58511 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.39
SMIM11AP58511 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.52■□□□□ 0.39
SMIM11AP58511 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM11AP58511 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM11AP58511 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
SMIM11AP58511 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SMIM11AP58511 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM11AP58511 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM11AP58511 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM11AP58511 SLC29A4P1-201ENST00000398760 971 ntBASIC17.51■□□□□ 0.39
SMIM11AP58511 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.51■□□□□ 0.39
SMIM11AP58511 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SMIM11AP58511 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SMIM11AP58511 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.51■□□□□ 0.39
SMIM11AP58511 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMIM11AP58511 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.51■□□□□ 0.39
SMIM11AP58511 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMIM11AP58511 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM11AP58511 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM11AP58511 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM11AP58511 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.5■□□□□ 0.39
SMIM11AP58511 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.5■□□□□ 0.39
SMIM11AP58511 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM11AP58511 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms