Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 BX276092.5-203ENST00000456199 560 ntBASIC18.24■□□□□ 0.51
CLDN6P56747 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN6P56747 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLDN6P56747 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CLDN6P56747 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CLDN6P56747 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 LINC01521-201ENST00000504184 1943 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 AC020907.5-201ENST00000624372 1936 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 AL512408.1-201ENST00000569378 2000 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 AC073314.1-201ENST00000568729 2216 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN6P56747 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 GPAT2P1-201ENST00000444924 1672 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 AC036111.1-201ENST00000533973 1582 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLDN6P56747 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 EMBP1-201ENST00000458200 901 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN6P56747 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN6P56747 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CLDN6P56747 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN6P56747 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN6P56747 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 IFNL4P1-201ENST00000607083 540 ntBASIC18.23■□□□□ 0.51
CLDN6P56747 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN6P56747 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN6P56747 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN6P56747 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN6P56747 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN6P56747 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN6P56747 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.22■□□□□ 0.51
CLDN6P56747 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN6P56747 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN6P56747 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN6P56747 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN6P56747 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN6P56747 AL121672.3-201ENST00000608644 468 ntBASIC18.22■□□□□ 0.51
CLDN6P56747 AC079602.3-201ENST00000623931 403 ntBASIC18.22■□□□□ 0.51
CLDN6P56747 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.22■□□□□ 0.51
CLDN6P56747 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN6P56747 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN6P56747 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN6P56747 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN6P56747 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN6P56747 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN6P56747 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN6P56747 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN6P56747 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN6P56747 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN6P56747 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms