Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.35■■□□□ 1.01
EPHB4P54760 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.35■■□□□ 1.01
EPHB4P54760 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHB4P54760 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.35■■□□□ 1.01
EPHB4P54760 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.35■■□□□ 1.01
EPHB4P54760 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.35■■□□□ 1.01
EPHB4P54760 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.35■■□□□ 1.01
EPHB4P54760 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
EPHB4P54760 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
EPHB4P54760 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHB4P54760 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
EPHB4P54760 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHB4P54760 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
EPHB4P54760 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHB4P54760 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHB4P54760 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EPHB4P54760 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.35■■□□□ 1.01
EPHB4P54760 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.35■■□□□ 1.01
EPHB4P54760 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EPHB4P54760 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
EPHB4P54760 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.34■■□□□ 1.01
EPHB4P54760 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
EPHB4P54760 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.34■■□□□ 1.01
EPHB4P54760 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
EPHB4P54760 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
EPHB4P54760 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
EPHB4P54760 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.34■■□□□ 1.01
EPHB4P54760 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.34■■□□□ 1.01
EPHB4P54760 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.34■■□□□ 1.01
EPHB4P54760 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.34■■□□□ 1.01
EPHB4P54760 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.34■■□□□ 1.01
EPHB4P54760 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
EPHB4P54760 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHB4P54760 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
EPHB4P54760 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
EPHB4P54760 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.33■■□□□ 1.01
EPHB4P54760 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
EPHB4P54760 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.33■■□□□ 1.01
EPHB4P54760 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.33■■□□□ 1.01
EPHB4P54760 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.33■■□□□ 1.01
EPHB4P54760 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.33■■□□□ 1.01
EPHB4P54760 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.33■■□□□ 1.01
EPHB4P54760 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.33■■□□□ 1.01
EPHB4P54760 AC083849.1-201ENST00000615227 514 ntBASIC21.33■■□□□ 1.01
EPHB4P54760 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.33■■□□□ 1.01
EPHB4P54760 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
EPHB4P54760 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
EPHB4P54760 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHB4P54760 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
EPHB4P54760 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.33■■□□□ 1
EPHB4P54760 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
EPHB4P54760 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.32■■□□□ 1
EPHB4P54760 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.32■■□□□ 1
EPHB4P54760 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.32■■□□□ 1
EPHB4P54760 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.32■■□□□ 1
EPHB4P54760 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 FDX1P1-201ENST00000449115 551 ntBASIC21.32■■□□□ 1
EPHB4P54760 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.32■■□□□ 1
EPHB4P54760 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.32■■□□□ 1
EPHB4P54760 Z85996.1-201ENST00000494644 937 ntBASIC21.32■■□□□ 1
EPHB4P54760 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.32■■□□□ 1
EPHB4P54760 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.32■■□□□ 1
EPHB4P54760 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.32■■□□□ 1
EPHB4P54760 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.32■■□□□ 1
EPHB4P54760 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.32■■□□□ 1
EPHB4P54760 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms