Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 LINC00167-201ENST00000530583 1419 ntBASIC20.94■□□□□ 0.94
ATN1P54259 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.94■□□□□ 0.94
ATN1P54259 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 Z83836.1-201ENST00000624605 1642 ntBASIC20.93■□□□□ 0.94
ATN1P54259 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 TSPY12P-201ENST00000421279 868 ntBASIC20.93■□□□□ 0.94
ATN1P54259 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.93■□□□□ 0.94
ATN1P54259 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.93■□□□□ 0.94
ATN1P54259 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.93■□□□□ 0.94
ATN1P54259 MIR3180-5-201ENST00000583743 153 ntBASIC20.93■□□□□ 0.94
ATN1P54259 AL353801.3-201ENST00000609898 542 ntBASIC20.93■□□□□ 0.94
ATN1P54259 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.93■□□□□ 0.94
ATN1P54259 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.93■□□□□ 0.94
ATN1P54259 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATN1P54259 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ATN1P54259 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.92■□□□□ 0.94
ATN1P54259 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATN1P54259 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATN1P54259 MCCD1P1-208ENST00000445732 328 ntBASIC20.92■□□□□ 0.94
ATN1P54259 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATN1P54259 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.92■□□□□ 0.94
ATN1P54259 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.92■□□□□ 0.94
ATN1P54259 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.92■□□□□ 0.94
ATN1P54259 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.92■□□□□ 0.94
ATN1P54259 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.92■□□□□ 0.94
ATN1P54259 MIR3917-201ENST00000580971 93 ntBASIC20.92■□□□□ 0.94
ATN1P54259 BX640515.1-201ENST00000617215 977 ntBASIC20.92■□□□□ 0.94
ATN1P54259 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.92■□□□□ 0.94
ATN1P54259 AC112497.1-201ENST00000624824 639 ntBASIC20.92■□□□□ 0.94
ATN1P54259 AF228730.7-201ENST00000641842 219 ntBASIC20.92■□□□□ 0.94
ATN1P54259 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.92■□□□□ 0.94
ATN1P54259 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.92■□□□□ 0.94
ATN1P54259 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATN1P54259 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.92■□□□□ 0.94
ATN1P54259 AC104417.2-201ENST00000562989 1793 ntBASIC20.92■□□□□ 0.94
ATN1P54259 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATN1P54259 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATN1P54259 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.91■□□□□ 0.94
ATN1P54259 KRT18P13-201ENST00000400056 1290 ntBASIC20.91■□□□□ 0.94
ATN1P54259 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATN1P54259 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATN1P54259 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.91■□□□□ 0.94
ATN1P54259 AC099336.1-202ENST00000602961 463 ntBASIC20.91■□□□□ 0.94
ATN1P54259 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATN1P54259 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATN1P54259 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.9■□□□□ 0.94
ATN1P54259 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATN1P54259 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.9■□□□□ 0.94
ATN1P54259 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATN1P54259 AC009237.14-201ENST00000609975 1594 ntBASIC20.9■□□□□ 0.94
ATN1P54259 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms