Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SPEG-225ENST00000617028 815 ntTSL 5 BASIC27.22■■□□□ 1.95
CLTCL1P53675 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC27.22■■□□□ 1.95
CLTCL1P53675 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CLTCL1P53675 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.22■■□□□ 1.95
CLTCL1P53675 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CLTCL1P53675 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC27.22■■□□□ 1.95
CLTCL1P53675 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC27.21■■□□□ 1.95
CLTCL1P53675 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC27.21■■□□□ 1.95
CLTCL1P53675 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
CLTCL1P53675 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC27.21■■□□□ 1.95
CLTCL1P53675 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC27.21■■□□□ 1.95
CLTCL1P53675 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC27.21■■□□□ 1.95
CLTCL1P53675 HOXB1-202ENST00000577092 1414 ntBASIC27.21■■□□□ 1.95
CLTCL1P53675 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC27.21■■□□□ 1.95
CLTCL1P53675 AL391807.1-203ENST00000604392 2365 ntBASIC27.21■■□□□ 1.95
CLTCL1P53675 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CLTCL1P53675 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC27.21■■□□□ 1.95
CLTCL1P53675 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
CLTCL1P53675 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC27.2■■□□□ 1.95
CLTCL1P53675 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
CLTCL1P53675 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC27.2■■□□□ 1.95
CLTCL1P53675 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CLTCL1P53675 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CLTCL1P53675 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CLTCL1P53675 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC27.2■■□□□ 1.95
CLTCL1P53675 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.95
CLTCL1P53675 AL512353.2-201ENST00000448759 1962 ntBASIC27.2■■□□□ 1.94
CLTCL1P53675 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CLTCL1P53675 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC27.2■■□□□ 1.94
CLTCL1P53675 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC27.2■■□□□ 1.94
CLTCL1P53675 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CLTCL1P53675 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC27.2■■□□□ 1.94
CLTCL1P53675 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CLTCL1P53675 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC27.19■■□□□ 1.94
CLTCL1P53675 TPSP2-201ENST00000561760 610 ntBASIC27.19■■□□□ 1.94
CLTCL1P53675 RNF126P1-202ENST00000569893 925 ntBASIC27.19■■□□□ 1.94
CLTCL1P53675 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC27.19■■□□□ 1.94
CLTCL1P53675 AC112497.1-201ENST00000624824 639 ntBASIC27.19■■□□□ 1.94
CLTCL1P53675 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 AL109659.2-201ENST00000606809 1674 ntBASIC27.19■■□□□ 1.94
CLTCL1P53675 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC27.19■■□□□ 1.94
CLTCL1P53675 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC27.19■■□□□ 1.94
CLTCL1P53675 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27.19■■□□□ 1.94
CLTCL1P53675 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLTCL1P53675 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC27.19■■□□□ 1.94
CLTCL1P53675 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC27.18■■□□□ 1.94
CLTCL1P53675 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CLTCL1P53675 AC008556.1-201ENST00000610908 2040 ntBASIC27.18■■□□□ 1.94
CLTCL1P53675 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC27.18■■□□□ 1.94
CLTCL1P53675 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CLTCL1P53675 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
CLTCL1P53675 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC27.18■■□□□ 1.94
CLTCL1P53675 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC27.18■■□□□ 1.94
CLTCL1P53675 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CLTCL1P53675 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CLTCL1P53675 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLTCL1P53675 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
CLTCL1P53675 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC27.17■■□□□ 1.94
CLTCL1P53675 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 PPIH-202ENST00000372549 327 ntTSL 3 BASIC27.17■■□□□ 1.94
CLTCL1P53675 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.17■■□□□ 1.94
CLTCL1P53675 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC27.17■■□□□ 1.94
CLTCL1P53675 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.17■■□□□ 1.94
CLTCL1P53675 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
CLTCL1P53675 TEN1-204ENST00000588202 862 ntTSL 3 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms