Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 AC016734.2-201ENST00000624325 1377 ntBASIC18.62■□□□□ 0.57
CSNK1EP49674 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.61■□□□□ 0.57
CSNK1EP49674 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CSNK1EP49674 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.61■□□□□ 0.57
CSNK1EP49674 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CSNK1EP49674 MCCD1P1-208ENST00000445732 328 ntBASIC18.61■□□□□ 0.57
CSNK1EP49674 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.61■□□□□ 0.57
CSNK1EP49674 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 AL121672.3-201ENST00000608644 468 ntBASIC18.61■□□□□ 0.57
CSNK1EP49674 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1EP49674 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
CSNK1EP49674 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1EP49674 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CSNK1EP49674 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1EP49674 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CSNK1EP49674 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1EP49674 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1EP49674 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1EP49674 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1EP49674 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CSNK1EP49674 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1EP49674 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.6■□□□□ 0.57
CSNK1EP49674 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
CSNK1EP49674 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.6■□□□□ 0.57
CSNK1EP49674 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.6■□□□□ 0.57
CSNK1EP49674 MIR3180-5-201ENST00000583743 153 ntBASIC18.6■□□□□ 0.57
CSNK1EP49674 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1EP49674 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.59■□□□□ 0.57
CSNK1EP49674 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1EP49674 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.59■□□□□ 0.57
CSNK1EP49674 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1EP49674 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1EP49674 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1EP49674 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1EP49674 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.58■□□□□ 0.57
CSNK1EP49674 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1EP49674 LINC01006-201ENST00000333319 2292 ntBASIC18.58■□□□□ 0.57
CSNK1EP49674 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CSNK1EP49674 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.58■□□□□ 0.57
CSNK1EP49674 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1EP49674 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 SEC1P-202ENST00000473944 940 ntBASIC18.58■□□□□ 0.56
CSNK1EP49674 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.58■□□□□ 0.56
CSNK1EP49674 AC079602.3-201ENST00000623931 403 ntBASIC18.58■□□□□ 0.56
CSNK1EP49674 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1EP49674 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms