Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.73■□□□□ 0.91
CASP4P49662 AP003071.4-201ENST00000562276 1284 ntBASIC20.73■□□□□ 0.91
CASP4P49662 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CASP4P49662 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CASP4P49662 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.73■□□□□ 0.91
CASP4P49662 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CASP4P49662 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.72■□□□□ 0.91
CASP4P49662 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CASP4P49662 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CASP4P49662 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CASP4P49662 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.72■□□□□ 0.91
CASP4P49662 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 AL355355.2-201ENST00000442321 338 ntBASIC20.72■□□□□ 0.91
CASP4P49662 TSPY15P-201ENST00000457163 923 ntBASIC20.72■□□□□ 0.91
CASP4P49662 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 PRSS44-201ENST00000515154 1146 ntBASIC20.72■□□□□ 0.91
CASP4P49662 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.72■□□□□ 0.91
CASP4P49662 AP000692.2-201ENST00000608391 879 ntBASIC20.72■□□□□ 0.91
CASP4P49662 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.72■□□□□ 0.91
CASP4P49662 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CASP4P49662 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.72■□□□□ 0.91
CASP4P49662 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP4P49662 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CASP4P49662 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CASP4P49662 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.71■□□□□ 0.91
CASP4P49662 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.71■□□□□ 0.91
CASP4P49662 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CASP4P49662 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CASP4P49662 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 CKBP1-201ENST00000565489 1086 ntBASIC20.71■□□□□ 0.91
CASP4P49662 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.71■□□□□ 0.91
CASP4P49662 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.71■□□□□ 0.91
CASP4P49662 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.71■□□□□ 0.91
CASP4P49662 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.71■□□□□ 0.91
CASP4P49662 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CASP4P49662 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CASP4P49662 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CASP4P49662 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP4P49662 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CASP4P49662 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP4P49662 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP4P49662 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CASP4P49662 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.7■□□□□ 0.9
CASP4P49662 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.7■□□□□ 0.9
CASP4P49662 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.7■□□□□ 0.9
CASP4P49662 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP4P49662 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP4P49662 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CASP4P49662 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASP4P49662 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CASP4P49662 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.69■□□□□ 0.9
CASP4P49662 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASP4P49662 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASP4P49662 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASP4P49662 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.69■□□□□ 0.9
CASP4P49662 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.69■□□□□ 0.9
CASP4P49662 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.69■□□□□ 0.9
CASP4P49662 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.69■□□□□ 0.9
CASP4P49662 MIR4497-201ENST00000583208 89 ntBASIC20.69■□□□□ 0.9
CASP4P49662 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms