Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.39■□□□□ 0.37
RFC3P40938 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RFC3P40938 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RFC3P40938 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFC3P40938 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.39■□□□□ 0.37
RFC3P40938 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RFC3P40938 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC3P40938 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC3P40938 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.38■□□□□ 0.37
RFC3P40938 BX664615.1-201ENST00000443558 458 ntBASIC17.38■□□□□ 0.37
RFC3P40938 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RFC3P40938 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC3P40938 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC3P40938 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC3P40938 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RFC3P40938 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC3P40938 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RFC3P40938 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
RFC3P40938 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC3P40938 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC3P40938 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 AC010653.2-201ENST00000623505 997 ntBASIC17.37■□□□□ 0.37
RFC3P40938 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC3P40938 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC3P40938 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC3P40938 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC3P40938 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
RFC3P40938 AC125437.2-201ENST00000625180 2167 ntBASIC17.36■□□□□ 0.37
RFC3P40938 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
RFC3P40938 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.36■□□□□ 0.37
RFC3P40938 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFC3P40938 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.36■□□□□ 0.37
RFC3P40938 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 AL138966.2-201ENST00000621997 464 ntBASIC17.36■□□□□ 0.37
RFC3P40938 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.36■□□□□ 0.37
RFC3P40938 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.36■□□□□ 0.37
RFC3P40938 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFC3P40938 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC3P40938 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
RFC3P40938 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.35■□□□□ 0.37
RFC3P40938 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.35■□□□□ 0.37
RFC3P40938 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.35■□□□□ 0.37
RFC3P40938 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.35■□□□□ 0.37
RFC3P40938 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.35■□□□□ 0.37
RFC3P40938 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFC3P40938 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms