Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGCLP35914 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HMGCLP35914 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCLP35914 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCLP35914 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HMGCLP35914 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLP35914 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HMGCLP35914 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLP35914 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGCLP35914 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGCLP35914 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 MMP23A-201ENST00000234610 1017 ntBASIC18.92■□□□□ 0.62
HMGCLP35914 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMGCLP35914 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLP35914 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLP35914 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.92■□□□□ 0.62
HMGCLP35914 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLP35914 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.92■□□□□ 0.62
HMGCLP35914 BX088651.1-201ENST00000540551 451 ntBASIC18.92■□□□□ 0.62
HMGCLP35914 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLP35914 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLP35914 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HMGCLP35914 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HMGCLP35914 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 SLC25A1P2-201ENST00000430693 912 ntBASIC18.91■□□□□ 0.62
HMGCLP35914 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.91■□□□□ 0.62
HMGCLP35914 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.91■□□□□ 0.62
HMGCLP35914 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.91■□□□□ 0.62
HMGCLP35914 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGCLP35914 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGCLP35914 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCLP35914 AC006333.2-201ENST00000607957 2099 ntBASIC18.91■□□□□ 0.62
HMGCLP35914 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCLP35914 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
HMGCLP35914 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
HMGCLP35914 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HMGCLP35914 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCLP35914 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCLP35914 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCLP35914 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 C2orf69P3-201ENST00000565542 1120 ntBASIC18.9■□□□□ 0.62
HMGCLP35914 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
HMGCLP35914 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCLP35914 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
HMGCLP35914 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms