Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.72■□□□□ 0.27
THBS4P35443 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.72■□□□□ 0.27
THBS4P35443 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
THBS4P35443 BX088651.1-201ENST00000540551 451 ntBASIC16.72■□□□□ 0.27
THBS4P35443 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.72■□□□□ 0.27
THBS4P35443 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.72■□□□□ 0.27
THBS4P35443 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 REXO1L10P-201ENST00000615707 1290 ntBASIC16.72■□□□□ 0.27
THBS4P35443 REXO1L12P-201ENST00000622156 912 ntBASIC16.72■□□□□ 0.27
THBS4P35443 AC131212.4-201ENST00000623606 975 ntBASIC16.72■□□□□ 0.27
THBS4P35443 HLA-A-209ENST00000638375 975 ntBASIC16.72■□□□□ 0.27
THBS4P35443 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS4P35443 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS4P35443 AL161938.1-201ENST00000569833 2180 ntBASIC16.72■□□□□ 0.27
THBS4P35443 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS4P35443 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
THBS4P35443 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
THBS4P35443 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
THBS4P35443 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.72■□□□□ 0.27
THBS4P35443 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.72■□□□□ 0.27
THBS4P35443 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS4P35443 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.71■□□□□ 0.27
THBS4P35443 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
THBS4P35443 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
THBS4P35443 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
THBS4P35443 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.71■□□□□ 0.27
THBS4P35443 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.71■□□□□ 0.27
THBS4P35443 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.71■□□□□ 0.27
THBS4P35443 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.71■□□□□ 0.27
THBS4P35443 AC073912.3-201ENST00000624414 853 ntBASIC16.71■□□□□ 0.27
THBS4P35443 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
THBS4P35443 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS4P35443 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.71■□□□□ 0.27
THBS4P35443 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
THBS4P35443 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
THBS4P35443 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
THBS4P35443 AC004980.1-204ENST00000429707 299 ntBASIC16.7■□□□□ 0.26
THBS4P35443 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.7■□□□□ 0.26
THBS4P35443 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.7■□□□□ 0.26
THBS4P35443 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.7■□□□□ 0.26
THBS4P35443 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.7■□□□□ 0.26
THBS4P35443 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.7■□□□□ 0.26
THBS4P35443 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS4P35443 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS4P35443 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.7■□□□□ 0.26
THBS4P35443 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS4P35443 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
THBS4P35443 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS4P35443 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS4P35443 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS4P35443 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.69■□□□□ 0.26
THBS4P35443 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS4P35443 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS4P35443 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms