Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXA11P31270 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.57■□□□□ 0.88
HOXA11P31270 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HOXA11P31270 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA11P31270 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXA11P31270 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA11P31270 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXA11P31270 AC036111.1-201ENST00000533973 1582 ntBASIC20.57■□□□□ 0.88
HOXA11P31270 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA11P31270 HYMAI.1-201ENST00000620949 238 ntBASIC20.57■□□□□ 0.88
HOXA11P31270 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
HOXA11P31270 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
HOXA11P31270 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA11P31270 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HOXA11P31270 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HOXA11P31270 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA11P31270 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HOXA11P31270 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 MCCD1P1-208ENST00000445732 328 ntBASIC20.56■□□□□ 0.88
HOXA11P31270 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA11P31270 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA11P31270 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA11P31270 FAM86EP-206ENST00000510506 987 ntBASIC20.56■□□□□ 0.88
HOXA11P31270 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA11P31270 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA11P31270 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA11P31270 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA11P31270 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA11P31270 AL512353.2-201ENST00000448759 1962 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA11P31270 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA11P31270 AC007952.6-201ENST00000573168 2673 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 AC003957.1-201ENST00000625108 2673 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 AL032819.2-201ENST00000624543 2162 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA11P31270 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA11P31270 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA11P31270 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA11P31270 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA11P31270 STARP1-201ENST00000397973 869 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA11P31270 MIR3180-5-201ENST00000583743 153 ntBASIC20.55■□□□□ 0.88
HOXA11P31270 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA11P31270 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA11P31270 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA11P31270 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA11P31270 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA11P31270 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXA11P31270 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXA11P31270 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA11P31270 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 AL671277.2-201ENST00000458060 996 ntBASIC20.54■□□□□ 0.88
HOXA11P31270 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXA11P31270 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA11P31270 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXA11P31270 AL121956.5-201ENST00000625261 221 ntBASIC20.54■□□□□ 0.88
HOXA11P31270 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA11P31270 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
HOXA11P31270 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
HOXA11P31270 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HOXA11P31270 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA11P31270 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA11P31270 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms