Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL596275.1-201ENST00000423464 877 ntBASIC17.42■□□□□ 0.38
SHC1P29353 AC004980.1-204ENST00000429707 299 ntBASIC17.42■□□□□ 0.38
SHC1P29353 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHC1P29353 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SHC1P29353 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SHC1P29353 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHC1P29353 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC1P29353 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHC1P29353 AC007613.1-201ENST00000572811 2597 ntBASIC17.41■□□□□ 0.38
SHC1P29353 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC1P29353 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHC1P29353 AIRN-201ENST00000601203 4374 ntBASIC17.41■□□□□ 0.38
SHC1P29353 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SHC1P29353 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SHC1P29353 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC1P29353 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC1P29353 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC1P29353 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHC1P29353 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SHC1P29353 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC1P29353 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC1P29353 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SHC1P29353 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC1P29353 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 AL138781.2-201ENST00000617896 1843 ntBASIC17.4■□□□□ 0.38
SHC1P29353 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHC1P29353 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC1P29353 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC1P29353 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC1P29353 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SHC1P29353 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.39■□□□□ 0.38
SHC1P29353 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHC1P29353 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC1P29353 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC1P29353 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC1P29353 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC1P29353 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC1P29353 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC1P29353 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC1P29353 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.39■□□□□ 0.37
SHC1P29353 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC1P29353 Z85996.1-201ENST00000494644 937 ntBASIC17.39■□□□□ 0.37
SHC1P29353 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.39■□□□□ 0.37
SHC1P29353 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC1P29353 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC1P29353 AL160286.2-201ENST00000567150 934 ntBASIC17.39■□□□□ 0.37
SHC1P29353 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC1P29353 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC1P29353 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms