Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PTPN6P29350 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTPN6P29350 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN6P29350 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN6P29350 KRASP1-201ENST00000407852 552 ntBASIC18.04■□□□□ 0.48
PTPN6P29350 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 UBE2SP1-201ENST00000450587 669 ntBASIC18.04■□□□□ 0.48
PTPN6P29350 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN6P29350 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.04■□□□□ 0.48
PTPN6P29350 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTPN6P29350 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTPN6P29350 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTPN6P29350 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PTPN6P29350 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN6P29350 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN6P29350 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTPN6P29350 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTPN6P29350 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN6P29350 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN6P29350 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.03■□□□□ 0.48
PTPN6P29350 AC083906.6-201ENST00000641366 219 ntBASIC18.03■□□□□ 0.48
PTPN6P29350 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PTPN6P29350 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN6P29350 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTPN6P29350 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN6P29350 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 BICD1-207ENST00000551848 1962 ntBASIC18.02■□□□□ 0.48
PTPN6P29350 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.02■□□□□ 0.48
PTPN6P29350 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN6P29350 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN6P29350 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.02■□□□□ 0.48
PTPN6P29350 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTPN6P29350 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.02■□□□□ 0.48
PTPN6P29350 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PTPN6P29350 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.02■□□□□ 0.48
PTPN6P29350 AC110285.5-201ENST00000611501 352 ntBASIC18.02■□□□□ 0.48
PTPN6P29350 AP006294.2-201ENST00000641667 209 ntBASIC18.02■□□□□ 0.48
PTPN6P29350 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN6P29350 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN6P29350 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN6P29350 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN6P29350 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.02■□□□□ 0.47
PTPN6P29350 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN6P29350 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms