Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL1P22362 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCL1P22362 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL1P22362 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL1P22362 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL1P22362 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.37■□□□□ 0.21
CCL1P22362 AC073592.3-201ENST00000625118 1834 ntBASIC16.37■□□□□ 0.21
CCL1P22362 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
CCL1P22362 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL1P22362 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL1P22362 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL1P22362 KRT8P11-201ENST00000409686 1436 ntBASIC16.36■□□□□ 0.21
CCL1P22362 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL1P22362 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCL1P22362 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 NIFKP9-201ENST00000419265 221 ntBASIC16.36■□□□□ 0.21
CCL1P22362 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL1P22362 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCL1P22362 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL1P22362 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 PRSS44-201ENST00000515154 1146 ntBASIC16.36■□□□□ 0.21
CCL1P22362 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.36■□□□□ 0.21
CCL1P22362 KRT18P6-201ENST00000555540 1265 ntBASIC16.36■□□□□ 0.21
CCL1P22362 AL353708.3-201ENST00000610272 989 ntBASIC16.36■□□□□ 0.21
CCL1P22362 AC110285.5-201ENST00000611501 352 ntBASIC16.36■□□□□ 0.21
CCL1P22362 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL1P22362 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCL1P22362 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCL1P22362 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCL1P22362 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL1P22362 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCL1P22362 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.35■□□□□ 0.21
CCL1P22362 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL1P22362 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 ESRRAP1-201ENST00000400596 1257 ntBASIC16.35■□□□□ 0.21
CCL1P22362 AC004980.1-204ENST00000429707 299 ntBASIC16.35■□□□□ 0.21
CCL1P22362 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL1P22362 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL1P22362 RN7SL471P-201ENST00000580476 299 ntBASIC16.35■□□□□ 0.21
CCL1P22362 AC131212.4-201ENST00000623606 975 ntBASIC16.35■□□□□ 0.21
CCL1P22362 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL1P22362 AC068587.9-201ENST00000641814 219 ntBASIC16.35■□□□□ 0.21
CCL1P22362 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL1P22362 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCL1P22362 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CCL1P22362 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL1P22362 AL390961.4-201ENST00000623958 2535 ntBASIC16.35■□□□□ 0.21
CCL1P22362 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCL1P22362 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 AL354751.1-201ENST00000412768 1863 ntBASIC16.34■□□□□ 0.21
CCL1P22362 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms