Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN2P17655 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.83■■□□□ 1.08
CAPN2P17655 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 KRT16P6-202ENST00000425692 1426 ntBASIC21.82■■□□□ 1.08
CAPN2P17655 KRT8P10-201ENST00000450021 1447 ntBASIC21.82■■□□□ 1.08
CAPN2P17655 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN2P17655 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN2P17655 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN2P17655 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 CKBP1-201ENST00000565489 1086 ntBASIC21.82■■□□□ 1.08
CAPN2P17655 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
CAPN2P17655 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 AC083849.1-201ENST00000615227 514 ntBASIC21.82■■□□□ 1.08
CAPN2P17655 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN2P17655 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CAPN2P17655 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CAPN2P17655 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN2P17655 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN2P17655 GABARAPL3-202ENST00000624044 1851 ntBASIC21.81■■□□□ 1.08
CAPN2P17655 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 PRELID1P1-202ENST00000567272 903 ntBASIC21.81■■□□□ 1.08
CAPN2P17655 HYMAI.1-201ENST00000620949 238 ntBASIC21.81■■□□□ 1.08
CAPN2P17655 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN2P17655 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CAPN2P17655 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN2P17655 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CAPN2P17655 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN2P17655 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN2P17655 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN2P17655 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
CAPN2P17655 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CAPN2P17655 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CAPN2P17655 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN2P17655 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CAPN2P17655 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN2P17655 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CAPN2P17655 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.79■■□□□ 1.08
CAPN2P17655 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.79■■□□□ 1.08
CAPN2P17655 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN2P17655 AC023511.2-201ENST00000618803 211 ntBASIC21.79■■□□□ 1.08
CAPN2P17655 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN2P17655 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN2P17655 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN2P17655 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms