Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 EMBP1-201ENST00000458200 901 ntBASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 AP000867.3-201ENST00000524675 377 ntBASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 AL391807.1-203ENST00000604392 2365 ntBASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 LINC00265-3P-201ENST00000447588 903 ntBASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CSB-PGBD3P0DP91 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 AC009078.2-202ENST00000463353 338 ntBASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSB-PGBD3P0DP91 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 MIR662-201ENST00000384847 95 ntBASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 MIR3917-201ENST00000580971 93 ntBASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.14■■□□□ 1.62
CSB-PGBD3P0DP91 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 AC007375.3-201ENST00000600936 2314 ntBASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CSB-PGBD3P0DP91 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 TSPY19P-201ENST00000418461 509 ntBASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 TSPY18P-201ENST00000441642 509 ntBASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms