Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TSPY21P-201ENST00000433481 731 ntBASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 NEK4P2-201ENST00000580004 1012 ntBASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 TCF3P1-201ENST00000423021 1937 ntBASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AC008622.2-201ENST00000617006 1229 ntBASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40ALP0C0E4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB40ALP0C0E4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
RAB40ALP0C0E4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB40ALP0C0E4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.89■□□□□ 0.46
RAB40ALP0C0E4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB40ALP0C0E4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AL441883.1-201ENST00000566170 1045 ntBASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AL023973.1-201ENST00000624619 620 ntBASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AL121956.5-201ENST00000625261 221 ntBASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AL358472.4-201ENST00000633140 710 ntBASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms