Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.2■□□□□ 0.66
SRPRAP08240 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
SRPRAP08240 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.2■□□□□ 0.66
SRPRAP08240 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.2■□□□□ 0.66
SRPRAP08240 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.2■□□□□ 0.66
SRPRAP08240 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.2■□□□□ 0.66
SRPRAP08240 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.2■□□□□ 0.66
SRPRAP08240 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 AC087388.1-201ENST00000571370 1112 ntBASIC19.2■□□□□ 0.66
SRPRAP08240 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.2■□□□□ 0.66
SRPRAP08240 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.2■□□□□ 0.66
SRPRAP08240 AL023973.1-201ENST00000624619 620 ntBASIC19.2■□□□□ 0.66
SRPRAP08240 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRPRAP08240 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SRPRAP08240 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.2■□□□□ 0.66
SRPRAP08240 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SRPRAP08240 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.19■□□□□ 0.66
SRPRAP08240 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SRPRAP08240 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.19■□□□□ 0.66
SRPRAP08240 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SRPRAP08240 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SRPRAP08240 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SRPRAP08240 AL023284.2-201ENST00000405850 579 ntBASIC19.19■□□□□ 0.66
SRPRAP08240 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.19■□□□□ 0.66
SRPRAP08240 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.19■□□□□ 0.66
SRPRAP08240 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.19■□□□□ 0.66
SRPRAP08240 AL441883.1-201ENST00000566170 1045 ntBASIC19.19■□□□□ 0.66
SRPRAP08240 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 GPAT2P1-201ENST00000444924 1672 ntBASIC19.19■□□□□ 0.66
SRPRAP08240 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRPRAP08240 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SRPRAP08240 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.18■□□□□ 0.66
SRPRAP08240 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.18■□□□□ 0.66
SRPRAP08240 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.18■□□□□ 0.66
SRPRAP08240 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.18■□□□□ 0.66
SRPRAP08240 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.18■□□□□ 0.66
SRPRAP08240 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.18■□□□□ 0.66
SRPRAP08240 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.18■□□□□ 0.66
SRPRAP08240 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SRPRAP08240 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SRPRAP08240 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SRPRAP08240 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRPRAP08240 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 FEM1AP3-201ENST00000403722 1741 ntBASIC19.17■□□□□ 0.66
SRPRAP08240 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 AL158211.5-201ENST00000623583 2518 ntBASIC19.17■□□□□ 0.66
SRPRAP08240 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.17■□□□□ 0.66
SRPRAP08240 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SRPRAP08240 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.17■□□□□ 0.66
SRPRAP08240 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.17■□□□□ 0.66
SRPRAP08240 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.17■□□□□ 0.66
SRPRAP08240 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.17■□□□□ 0.66
SRPRAP08240 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 MCCD1P1-208ENST00000445732 328 ntBASIC19.17■□□□□ 0.66
SRPRAP08240 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.17■□□□□ 0.66
SRPRAP08240 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.17■□□□□ 0.66
SRPRAP08240 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.17■□□□□ 0.66
SRPRAP08240 MYC-208ENST00000641036 567 ntBASIC19.17■□□□□ 0.66
SRPRAP08240 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms