Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 KRT8P32-201ENST00000512863 1461 ntBASIC22.22■■□□□ 1.15
COL2A1P02458 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.22■■□□□ 1.15
COL2A1P02458 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.22■■□□□ 1.15
COL2A1P02458 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.22■■□□□ 1.15
COL2A1P02458 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.22■■□□□ 1.15
COL2A1P02458 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.22■■□□□ 1.15
COL2A1P02458 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.22■■□□□ 1.15
COL2A1P02458 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.22■■□□□ 1.15
COL2A1P02458 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL2A1P02458 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL2A1P02458 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL2A1P02458 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL2A1P02458 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL2A1P02458 FEM1AP3-201ENST00000403722 1741 ntBASIC22.21■■□□□ 1.15
COL2A1P02458 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL2A1P02458 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.21■■□□□ 1.15
COL2A1P02458 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COL2A1P02458 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.21■■□□□ 1.15
COL2A1P02458 AC104390.1-201ENST00000555663 520 ntBASIC22.21■■□□□ 1.15
COL2A1P02458 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.21■■□□□ 1.15
COL2A1P02458 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.21■■□□□ 1.15
COL2A1P02458 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.21■■□□□ 1.15
COL2A1P02458 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.2■■□□□ 1.15
COL2A1P02458 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.2■■□□□ 1.14
COL2A1P02458 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL2A1P02458 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL2A1P02458 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL2A1P02458 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.2■■□□□ 1.14
COL2A1P02458 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
COL2A1P02458 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.2■■□□□ 1.14
COL2A1P02458 AL450487.1-201ENST00000426799 995 ntBASIC22.2■■□□□ 1.14
COL2A1P02458 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.2■■□□□ 1.14
COL2A1P02458 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.2■■□□□ 1.14
COL2A1P02458 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL2A1P02458 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL2A1P02458 AL162741.1-201ENST00000565563 1558 ntBASIC22.2■■□□□ 1.14
COL2A1P02458 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
COL2A1P02458 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.19■■□□□ 1.14
COL2A1P02458 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL2A1P02458 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.19■■□□□ 1.14
COL2A1P02458 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.19■■□□□ 1.14
COL2A1P02458 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 AC010240.3-201ENST00000607688 395 ntBASIC22.19■■□□□ 1.14
COL2A1P02458 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 IRX1P1-201ENST00000438849 1838 ntBASIC22.19■■□□□ 1.14
COL2A1P02458 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL2A1P02458 AC008556.1-201ENST00000610908 2040 ntBASIC22.18■■□□□ 1.14
COL2A1P02458 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 AC141586.3-201ENST00000562166 1838 ntBASIC22.18■■□□□ 1.14
COL2A1P02458 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.18■■□□□ 1.14
COL2A1P02458 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.18■■□□□ 1.14
COL2A1P02458 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.18■■□□□ 1.14
COL2A1P02458 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.18■■□□□ 1.14
COL2A1P02458 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 AL391807.1-203ENST00000604392 2365 ntBASIC22.18■■□□□ 1.14
COL2A1P02458 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL2A1P02458 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.17■■□□□ 1.14
COL2A1P02458 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL2A1P02458 MIR662-201ENST00000384847 95 ntBASIC22.17■■□□□ 1.14
COL2A1P02458 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.17■■□□□ 1.14
COL2A1P02458 KRT18P23-201ENST00000435622 1283 ntBASIC22.17■■□□□ 1.14
COL2A1P02458 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.17■■□□□ 1.14
COL2A1P02458 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COL2A1P02458 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL2A1P02458 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.17■■□□□ 1.14
COL2A1P02458 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL2A1P02458 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL2A1P02458 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms