Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.43■□□□□ 0.22
DHFRP00374 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.43■□□□□ 0.22
DHFRP00374 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.43■□□□□ 0.22
DHFRP00374 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
DHFRP00374 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.43■□□□□ 0.22
DHFRP00374 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DHFRP00374 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DHFRP00374 AC141586.5-201ENST00000624546 2050 ntBASIC16.42■□□□□ 0.22
DHFRP00374 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
DHFRP00374 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
DHFRP00374 AC124067.4-201ENST00000519691 2379 ntBASIC16.42■□□□□ 0.22
DHFRP00374 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DHFRP00374 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.42■□□□□ 0.22
DHFRP00374 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.42■□□□□ 0.22
DHFRP00374 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.42■□□□□ 0.22
DHFRP00374 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.42■□□□□ 0.22
DHFRP00374 AC138907.5-202ENST00000569484 235 ntBASIC16.42■□□□□ 0.22
DHFRP00374 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
DHFRP00374 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DHFRP00374 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DHFRP00374 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.41■□□□□ 0.22
DHFRP00374 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.41■□□□□ 0.22
DHFRP00374 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.41■□□□□ 0.22
DHFRP00374 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.41■□□□□ 0.22
DHFRP00374 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.41■□□□□ 0.22
DHFRP00374 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.41■□□□□ 0.22
DHFRP00374 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.41■□□□□ 0.22
DHFRP00374 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DHFRP00374 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DHFRP00374 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 LINC00896-202ENST00000609602 2128 ntBASIC16.4■□□□□ 0.22
DHFRP00374 AC073592.3-201ENST00000625118 1834 ntBASIC16.4■□□□□ 0.22
DHFRP00374 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 GNAS-203ENST00000306120 1878 ntBASIC16.4■□□□□ 0.22
DHFRP00374 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 KRT8P17-201ENST00000453110 1448 ntBASIC16.4■□□□□ 0.22
DHFRP00374 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DHFRP00374 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.4■□□□□ 0.22
DHFRP00374 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L2-201ENST00000561772 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L6-201ENST00000626483 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L1-201ENST00000627662 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L8-201ENST00000629013 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L3-201ENST00000630187 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L7-201ENST00000630678 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 DUX4L5-201ENST00000630834 1275 ntBASIC16.4■□□□□ 0.22
DHFRP00374 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms