Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CCNT1O60563 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 AP000974.1-201ENST00000623909 2387 ntBASIC21.6■■□□□ 1.05
CCNT1O60563 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNT1O60563 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CCNT1O60563 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNT1O60563 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNT1O60563 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCNT1O60563 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNT1O60563 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 FITM1-202ENST00000559294 800 ntBASIC21.59■■□□□ 1.05
CCNT1O60563 AP005242.2-201ENST00000580065 1175 ntBASIC21.59■■□□□ 1.05
CCNT1O60563 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNT1O60563 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNT1O60563 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCNT1O60563 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNT1O60563 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNT1O60563 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 AC087289.5-201ENST00000586076 3175 ntBASIC21.58■■□□□ 1.05
CCNT1O60563 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCNT1O60563 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNT1O60563 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCNT1O60563 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNT1O60563 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNT1O60563 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.58■■□□□ 1.04
CCNT1O60563 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCNT1O60563 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNT1O60563 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNT1O60563 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNT1O60563 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCNT1O60563 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNT1O60563 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNT1O60563 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNT1O60563 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.56■■□□□ 1.04
CCNT1O60563 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CCNT1O60563 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNT1O60563 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNT1O60563 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.56■■□□□ 1.04
CCNT1O60563 BX088651.1-201ENST00000540551 451 ntBASIC21.56■■□□□ 1.04
CCNT1O60563 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.56■■□□□ 1.04
CCNT1O60563 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.56■■□□□ 1.04
CCNT1O60563 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCNT1O60563 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CCNT1O60563 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNT1O60563 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCNT1O60563 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNT1O60563 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNT1O60563 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.56■■□□□ 1.04
CCNT1O60563 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 AC018445.3-201ENST00000624177 1945 ntBASIC21.55■■□□□ 1.04
CCNT1O60563 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.55■■□□□ 1.04
CCNT1O60563 AC098818.2-201ENST00000564925 2320 ntBASIC21.55■■□□□ 1.04
CCNT1O60563 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 MMP23A-201ENST00000234610 1017 ntBASIC21.55■■□□□ 1.04
CCNT1O60563 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNT1O60563 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNT1O60563 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.55■■□□□ 1.04
CCNT1O60563 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CCNT1O60563 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms