Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.05■□□□□ 0.48
PROM1O43490 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 MIR718-201ENST00000390190 70 ntBASIC18.05■□□□□ 0.48
PROM1O43490 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.05■□□□□ 0.48
PROM1O43490 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 AC008040.2-201ENST00000461049 708 ntBASIC18.05■□□□□ 0.48
PROM1O43490 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.05■□□□□ 0.48
PROM1O43490 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.05■□□□□ 0.48
PROM1O43490 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 FSCN1P1-201ENST00000568912 1481 ntBASIC18.05■□□□□ 0.48
PROM1O43490 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 TNXA-203ENST00000507684 2038 ntBASIC18.05■□□□□ 0.48
PROM1O43490 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PROM1O43490 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
PROM1O43490 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PROM1O43490 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.04■□□□□ 0.48
PROM1O43490 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.04■□□□□ 0.48
PROM1O43490 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.04■□□□□ 0.48
PROM1O43490 MESTP1-201ENST00000404287 994 ntBASIC18.04■□□□□ 0.48
PROM1O43490 B3GAT3P1-201ENST00000471720 806 ntBASIC18.04■□□□□ 0.48
PROM1O43490 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 AC116562.2-201ENST00000507042 360 ntBASIC18.04■□□□□ 0.48
PROM1O43490 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.04■□□□□ 0.48
PROM1O43490 NUDT16P1-203ENST00000513809 620 ntBASIC18.04■□□□□ 0.48
PROM1O43490 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 AC011298.2-201ENST00000617989 482 ntBASIC18.04■□□□□ 0.48
PROM1O43490 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.04■□□□□ 0.48
PROM1O43490 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PROM1O43490 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 LETM1P2-201ENST00000597330 2178 ntBASIC18.03■□□□□ 0.48
PROM1O43490 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.03■□□□□ 0.48
PROM1O43490 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.03■□□□□ 0.48
PROM1O43490 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.03■□□□□ 0.48
PROM1O43490 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 KRT8P11-201ENST00000409686 1436 ntBASIC18.03■□□□□ 0.48
PROM1O43490 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PROM1O43490 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.03■□□□□ 0.48
PROM1O43490 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PROM1O43490 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PROM1O43490 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PROM1O43490 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PROM1O43490 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PROM1O43490 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.02■□□□□ 0.48
PROM1O43490 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PROM1O43490 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.02■□□□□ 0.48
PROM1O43490 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms