Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.85■□□□□ 0.45
RRP8O43159 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.85■□□□□ 0.45
RRP8O43159 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.85■□□□□ 0.45
RRP8O43159 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.85■□□□□ 0.45
RRP8O43159 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 AL162741.1-201ENST00000565563 1558 ntBASIC17.85■□□□□ 0.45
RRP8O43159 AC012615.1-201ENST00000565797 1299 ntBASIC17.85■□□□□ 0.45
RRP8O43159 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.85■□□□□ 0.45
RRP8O43159 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.85■□□□□ 0.45
RRP8O43159 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RRP8O43159 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.84■□□□□ 0.45
RRP8O43159 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.84■□□□□ 0.45
RRP8O43159 TSPY22P-201ENST00000427496 604 ntBASIC17.84■□□□□ 0.45
RRP8O43159 PMS2P1-201ENST00000431037 1228 ntBASIC17.84■□□□□ 0.45
RRP8O43159 DRAXINP1-201ENST00000437611 948 ntBASIC17.84■□□□□ 0.45
RRP8O43159 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.84■□□□□ 0.45
RRP8O43159 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.84■□□□□ 0.45
RRP8O43159 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.84■□□□□ 0.45
RRP8O43159 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.84■□□□□ 0.45
RRP8O43159 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.84■□□□□ 0.45
RRP8O43159 SLC25A6P4-201ENST00000586535 553 ntBASIC17.84■□□□□ 0.45
RRP8O43159 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.84■□□□□ 0.45
RRP8O43159 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.84■□□□□ 0.45
RRP8O43159 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.84■□□□□ 0.45
RRP8O43159 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RRP8O43159 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RRP8O43159 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RRP8O43159 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RRP8O43159 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RRP8O43159 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.83■□□□□ 0.45
RRP8O43159 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RRP8O43159 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.83■□□□□ 0.44
RRP8O43159 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.83■□□□□ 0.44
RRP8O43159 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.83■□□□□ 0.44
RRP8O43159 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.83■□□□□ 0.44
RRP8O43159 AL121912.1-201ENST00000603683 238 ntBASIC17.83■□□□□ 0.44
RRP8O43159 AC024243.1-201ENST00000609234 778 ntBASIC17.83■□□□□ 0.44
RRP8O43159 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.83■□□□□ 0.44
RRP8O43159 BX640515.1-201ENST00000617215 977 ntBASIC17.83■□□□□ 0.44
RRP8O43159 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RRP8O43159 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.83■□□□□ 0.44
RRP8O43159 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RRP8O43159 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.83■□□□□ 0.44
RRP8O43159 AP001271.2-201ENST00000624018 1556 ntBASIC17.83■□□□□ 0.44
RRP8O43159 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.82■□□□□ 0.44
RRP8O43159 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
RRP8O43159 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.82■□□□□ 0.44
RRP8O43159 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.82■□□□□ 0.44
RRP8O43159 AL590627.1-203ENST00000421194 1026 ntBASIC17.82■□□□□ 0.44
RRP8O43159 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.82■□□□□ 0.44
RRP8O43159 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RRP8O43159 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.82■□□□□ 0.44
RRP8O43159 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
RRP8O43159 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RRP8O43159 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.82■□□□□ 0.44
RRP8O43159 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
RRP8O43159 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RRP8O43159 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RRP8O43159 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.81■□□□□ 0.44
RRP8O43159 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RRP8O43159 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms