Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHL1O00533 AK4P3-201ENST00000418260 669 ntBASIC24.44■■□□□ 1.5
CHL1O00533 AC009947.2-201ENST00000444014 672 ntBASIC24.44■■□□□ 1.5
CHL1O00533 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.44■■□□□ 1.5
CHL1O00533 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.44■■□□□ 1.5
CHL1O00533 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.44■■□□□ 1.5
CHL1O00533 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHL1O00533 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHL1O00533 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.44■■□□□ 1.5
CHL1O00533 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHL1O00533 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHL1O00533 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.43■■□□□ 1.5
CHL1O00533 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.43■■□□□ 1.5
CHL1O00533 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.43■■□□□ 1.5
CHL1O00533 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 AC063952.2-201ENST00000498792 1227 ntBASIC24.43■■□□□ 1.5
CHL1O00533 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.43■■□□□ 1.5
CHL1O00533 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.43■■□□□ 1.5
CHL1O00533 NEK4P2-201ENST00000580004 1012 ntBASIC24.43■■□□□ 1.5
CHL1O00533 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.43■■□□□ 1.5
CHL1O00533 AL109659.2-201ENST00000606809 1674 ntBASIC24.43■■□□□ 1.5
CHL1O00533 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.43■■□□□ 1.5
CHL1O00533 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHL1O00533 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CHL1O00533 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.42■■□□□ 1.5
CHL1O00533 AL049812.1-201ENST00000432563 2267 ntBASIC24.42■■□□□ 1.5
CHL1O00533 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.42■■□□□ 1.5
CHL1O00533 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.42■■□□□ 1.5
CHL1O00533 RNF152P1-201ENST00000397754 604 ntBASIC24.42■■□□□ 1.5
CHL1O00533 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.42■■□□□ 1.5
CHL1O00533 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.42■■□□□ 1.5
CHL1O00533 AL441883.1-201ENST00000566170 1045 ntBASIC24.42■■□□□ 1.5
CHL1O00533 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CHL1O00533 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CHL1O00533 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CHL1O00533 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHL1O00533 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.42■■□□□ 1.5
CHL1O00533 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 RCC2P3-201ENST00000418112 1537 ntBASIC24.41■■□□□ 1.5
CHL1O00533 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CHL1O00533 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.41■■□□□ 1.5
CHL1O00533 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.41■■□□□ 1.5
CHL1O00533 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CHL1O00533 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.41■■□□□ 1.5
CHL1O00533 MCCD1P1-208ENST00000445732 328 ntBASIC24.41■■□□□ 1.5
CHL1O00533 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.41■■□□□ 1.5
CHL1O00533 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.41■■□□□ 1.5
CHL1O00533 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 AL023973.1-201ENST00000624619 620 ntBASIC24.41■■□□□ 1.5
CHL1O00533 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.41■■□□□ 1.5
CHL1O00533 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
CHL1O00533 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.41■■□□□ 1.5
CHL1O00533 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CHL1O00533 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHL1O00533 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
CHL1O00533 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.4■■□□□ 1.5
CHL1O00533 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.4■■□□□ 1.5
CHL1O00533 TSPY5P-201ENST00000426936 936 ntBASIC24.4■■□□□ 1.5
CHL1O00533 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.4■■□□□ 1.5
CHL1O00533 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.4■■□□□ 1.5
CHL1O00533 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.4■■□□□ 1.5
CHL1O00533 MIR3180-5-201ENST00000583743 153 ntBASIC24.4■■□□□ 1.5
CHL1O00533 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 AL445228.2-201ENST00000605589 952 ntBASIC24.4■■□□□ 1.5
CHL1O00533 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHL1O00533 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms