Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SBNO1A3KN83 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SBNO1A3KN83 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SBNO1A3KN83 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SBNO1A3KN83 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SBNO1A3KN83 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SBNO1A3KN83 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 AP000593.1-201ENST00000393668 712 ntBASIC25.75■■□□□ 1.71
SBNO1A3KN83 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SBNO1A3KN83 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
SBNO1A3KN83 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.74■■□□□ 1.71
SBNO1A3KN83 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SBNO1A3KN83 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SBNO1A3KN83 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SBNO1A3KN83 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SBNO1A3KN83 MRPL3P1-201ENST00000400109 1033 ntBASIC25.73■■□□□ 1.71
SBNO1A3KN83 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 CALM3-211ENST00000598871 561 ntTSL 4 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 AL121912.1-201ENST00000603683 238 ntBASIC25.73■■□□□ 1.71
SBNO1A3KN83 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC25.73■■□□□ 1.71
SBNO1A3KN83 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SBNO1A3KN83 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 TSPY12P-201ENST00000421279 868 ntBASIC25.72■■□□□ 1.71
SBNO1A3KN83 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 KRT8P3-201ENST00000519669 1449 ntBASIC25.72■■□□□ 1.71
SBNO1A3KN83 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SBNO1A3KN83 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SBNO1A3KN83 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.71■■□□□ 1.71
SBNO1A3KN83 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 LINC01711-201ENST00000598340 967 ntBASIC25.71■■□□□ 1.71
SBNO1A3KN83 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SBNO1A3KN83 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SBNO1A3KN83 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 KRT16P4-201ENST00000453883 522 ntBASIC25.7■■□□□ 1.71
SBNO1A3KN83 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms