Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.34■■□□□ 1.97
CCDC144AA2RUR9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.34■■□□□ 1.97
CCDC144AA2RUR9 LINC01311-201ENST00000565162 1445 ntBASIC27.34■■□□□ 1.97
CCDC144AA2RUR9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.34■■□□□ 1.97
CCDC144AA2RUR9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 SEC1P-202ENST00000473944 940 ntBASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 RCC2P3-201ENST00000418112 1537 ntBASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 IRX1P1-201ENST00000438849 1838 ntBASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC144AA2RUR9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 HBZP1-201ENST00000354915 429 ntBASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 AC034232.1-201ENST00000506026 1064 ntBASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.96
CCDC144AA2RUR9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 AL512353.2-201ENST00000448759 1962 ntBASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 AL109659.2-201ENST00000606809 1674 ntBASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 AC024243.1-201ENST00000609234 778 ntBASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC144AA2RUR9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 AC141586.3-201ENST00000562166 1838 ntBASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC144AA2RUR9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC144AA2RUR9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 UBQLN4P1-201ENST00000461599 1801 ntBASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC27.29■■□□□ 1.96
CCDC144AA2RUR9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms