Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 Z85996.1-201ENST00000494644 937 ntBASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PRSS44-201ENST00000515154 1146 ntBASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 C1QBPP2-201ENST00000528754 825 ntBASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC083906.6-201ENST00000641366 219 ntBASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-4A0A1B0GX49 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 HTR7P1-201ENST00000538670 1336 ntBASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC020763.4-201ENST00000623414 4170 ntBASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 FAM201B-201ENST00000458407 597 ntBASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 RARRES2P10-201ENST00000564312 460 ntBASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC026271.3-201ENST00000571884 352 ntBASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-4A0A1B0GX49 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms