Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 TSPY5P-201ENST00000426936 936 ntBASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 HOMER2P1-201ENST00000455653 964 ntBASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV10A0A0B4J240 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 FAM8A6P-201ENST00000407496 1135 ntBASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV10A0A0B4J240 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV10A0A0B4J240 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms