Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV5-3A0A0A0MS03 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV5-3A0A0A0MS03 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV5-3A0A0A0MS03 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV5-3A0A0A0MS03 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC142086.2-201ENST00000569753 217 ntBASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC133041.1-202ENST00000642053 222 ntBASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV5-3A0A0A0MS03 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 NBPF21P-201ENST00000425093 1451 ntBASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV5-3A0A0A0MS03 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 POU5F1P3-201ENST00000428824 1078 ntBASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 Z85996.1-201ENST00000494644 937 ntBASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC008403.3-201ENST00000598924 454 ntBASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 AC068587.9-201ENST00000641814 219 ntBASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV5-3A0A0A0MS03 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 UNC93B5-201ENST00000530315 699 ntBASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.8■□□□□ 0.44
TRBV5-3A0A0A0MS03 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms