Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV30A0A087WSZ9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV30A0A087WSZ9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 FEM1AP3-201ENST00000403722 1741 ntBASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV30A0A087WSZ9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV30A0A087WSZ9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 TSPY21P-201ENST00000433481 731 ntBASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AC104771.1-201ENST00000603335 964 ntBASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AC006333.2-201ENST00000607957 2099 ntBASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms