Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-257P-201ENST00000410238 98 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 RN7SKP53-201ENST00000411337 315 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC009963.1-201ENST00000417265 157 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC008267.6-201ENST00000441664 139 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 TGIF1P1-201ENST00000558095 802 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC009127.3-201ENST00000570531 403 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 MIR4277-201ENST00000578298 84 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 AC126323.6-202ENST00000568092 3511 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC100821.1-201ENST00000523153 2479 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-239P-201ENST00000390990 99 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 U3.30-201ENST00000391308 210 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AL160275.2-201ENST00000412010 394 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC012308.1-201ENST00000451232 178 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 Y_RNA.637-201ENST00000459424 114 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-581P-201ENST00000516214 105 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 RNU1-6P-201ENST00000516290 144 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 SNORA31.16-201ENST00000516773 139 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC100767.1-201ENST00000528178 123 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AP002001.1-203ENST00000534002 267 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 NACAP3-201ENST00000552100 481 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 MIR5699-201ENST00000578903 90 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AC090897.2-201ENST00000581715 130 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 AL034408.1-202ENST00000636088 415 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 MIR3674-201ENST00000636576 68 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 SALL4P2-201ENST00000423288 2910 ntBASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB11Q9Y5F2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-818P-201ENST00000364837 108 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-622P-201ENST00000384272 103 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC019205.3-201ENST00000424573 156 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 HMGN2P10-201ENST00000448085 265 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AL162591.2-201ENST00000449634 317 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 RPL26P9-201ENST00000457466 433 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC078817.1-201ENST00000492623 435 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB11Q9Y5F2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 RNU1-62P-201ENST00000362599 164 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 MIR607-201ENST00000385241 96 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 AC096649.2-201ENST00000416186 393 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 CR769767.1-201ENST00000436337 346 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 MIR548X2-201ENST00000579776 100 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 RN7SL690P-201ENST00000582087 240 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 MIR4715-201ENST00000584117 79 ntBASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms