Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 Y_RNA.383-201ENST00000383855 97 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-1035P-201ENST00000384477 107 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 RN7SKP284-201ENST00000411002 343 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 WARS2P1-201ENST00000429678 537 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AL500522.2-201ENST00000448562 343 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AL451050.1-201ENST00000450126 415 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC007395.1-201ENST00000451333 677 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AL691482.1-201ENST00000453255 87 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 SNORD2.1-201ENST00000458762 69 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 MIR5685-201ENST00000579080 79 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 MIR6867-201ENST00000610636 67 ntBASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HCN4Q9Y3Q4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-1289P-201ENST00000384431 106 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 RNU1-82P-201ENST00000390851 165 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 SNORA46.1-201ENST00000391069 153 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 COX6B1P7-201ENST00000430845 235 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AP001025.1-201ENST00000486139 332 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC097462.2-201ENST00000504623 481 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-1282P-201ENST00000516735 96 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC005868.1-201ENST00000536421 331 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AL391261.3-201ENST00000557194 520 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 FTX_3.1-201ENST00000610451 147 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC073349.3-201ENST00000617616 186 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 SNORA43.4-201ENST00000629559 138 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 AC125257.1-201ENST00000560400 2930 ntBASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HCN4Q9Y3Q4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.65□□□□□ -1.66
HCN4Q9Y3Q4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HCN4Q9Y3Q4 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.65□□□□□ -1.66
HCN4Q9Y3Q4 SNORD115-8-201ENST00000363856 82 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 RNU1-132P-201ENST00000364300 164 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 SNORD115-38-201ENST00000365037 82 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 Y_RNA.418-201ENST00000384029 102 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-804P-201ENST00000384286 107 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 HMGN2P21-201ENST00000447764 270 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 S100A11P1-201ENST00000477525 312 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-58P-201ENST00000517143 103 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 CR383656.8-201ENST00000549046 145 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 HSPE1P5-201ENST00000561489 272 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 MIR5571-201ENST00000577998 113 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 AL138963.2-201ENST00000605137 226 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 AC108706.1-201ENST00000611053 297 ntBASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HCN4Q9Y3Q4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 FTLP6-201ENST00000355274 422 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-961P-201ENST00000363893 105 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 Y_RNA.304-201ENST00000365011 112 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-1175P-201ENST00000365200 107 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RNU6-898P-201ENST00000365627 104 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RPL21P65-201ENST00000406094 466 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 RPL23AP36-201ENST00000413895 458 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 AL358075.3-201ENST00000426289 226 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 SNORA40.9-201ENST00000515895 93 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 MTND5P41-201ENST00000517498 206 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 AC090281.1-201ENST00000523019 276 ntBASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCN4Q9Y3Q4 CYCSP40-201ENST00000575927 294 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms