Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 IGHVIII-44-202ENST00000636235 289 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP35Q9P2H5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
USP35Q9P2H5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.25□□□□□ -1.73
USP35Q9P2H5 RNU6-78P-201ENST00000362897 107 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 SNORA71.1-201ENST00000364523 117 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 SNORA54-201ENST00000384281 123 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 Y_RNA.530-201ENST00000384587 101 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 Y_RNA.615-201ENST00000410769 117 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 AC009161.1-201ENST00000417306 376 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 USP9YP20-201ENST00000419224 558 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 MRPS10P2-201ENST00000431226 381 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 USP9YP28-201ENST00000435142 589 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 MTCO3P18-201ENST00000440206 761 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 AL590639.1-201ENST00000456484 337 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 CENPBD1P1-201ENST00000464061 469 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 RPS29P26-201ENST00000477483 171 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.25□□□□□ -1.73
USP35Q9P2H5 MTCYBP18-201ENST00000501056 747 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.25□□□□□ -1.73
USP35Q9P2H5 RNU6-358P-201ENST00000516564 75 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 SNORA70.19-201ENST00000516717 90 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.25□□□□□ -1.73
USP35Q9P2H5 U4.7-201ENST00000638126 106 ntBASIC4.25□□□□□ -1.73
USP35Q9P2H5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP35Q9P2H5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-37P-201ENST00000362692 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-11P-201ENST00000364234 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-25P-201ENST00000383873 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-1-201ENST00000383898 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-48P-201ENST00000384161 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-36P-201ENST00000384172 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-4P-201ENST00000384205 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-5P-201ENST00000384238 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-3P-201ENST00000384314 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-16P-201ENST00000384385 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-843P-201ENST00000384454 104 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-15P-201ENST00000384534 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-2-201ENST00000384627 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-29P-201ENST00000384637 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-9-201ENST00000384776 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-33P-201ENST00000384793 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 MIR1261-201ENST00000408659 82 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RN7SKP123-201ENST00000410732 291 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 SNORD56-201ENST00000413522 71 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RPL7P37-201ENST00000425095 738 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 AL139415.2-201ENST00000431968 163 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 AC007547.1-201ENST00000462177 490 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 AC117503.1-201ENST00000472241 394 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RPL23AP45-201ENST00000476406 468 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 TRBVA-201ENST00000498804 316 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 MTCYBP40-201ENST00000509390 1135 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RN7SKP132-201ENST00000516001 208 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 AF235103.2-201ENST00000525753 346 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 RNU6-6P-201ENST00000606623 107 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.24□□□□□ -1.73
USP35Q9P2H5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.24□□□□□ -1.73
USP35Q9P2H5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP35Q9P2H5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP35Q9P2H5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP35Q9P2H5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP35Q9P2H5 AC010329.5-201ENST00000623497 2174 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP35Q9P2H5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP35Q9P2H5 AC138393.1-203ENST00000327086 343 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 SNORA51.4-201ENST00000364993 124 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 SNORA7.4-201ENST00000384249 137 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 AC244505.4-201ENST00000434905 287 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 NDUFA5P4-201ENST00000436704 385 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 HMGB1P31-201ENST00000437242 427 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 SSXP5-201ENST00000443473 287 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 AP000852.1-201ENST00000472460 573 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 RNA5SP385-201ENST00000515947 110 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.23□□□□□ -1.73
USP35Q9P2H5 AC060780.3-201ENST00000589464 80 ntBASIC4.23□□□□□ -1.73
USP35Q9P2H5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.23□□□□□ -1.73
USP35Q9P2H5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
USP35Q9P2H5 MTND5P19-201ENST00000424872 1794 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 RNU6-858P-201ENST00000362436 107 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.22□□□□□ -1.73
USP35Q9P2H5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.22□□□□□ -1.73
USP35Q9P2H5 AC004383.1-201ENST00000438135 289 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP35Q9P2H5 AC013470.1-201ENST00000453438 462 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 RPL31P58-201ENST00000469001 379 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 FAM206BP-201ENST00000510179 541 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 AF213884.2-201ENST00000510417 903 ntBASIC4.22□□□□□ -1.73
USP35Q9P2H5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms