Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 AC021739.1-201ENST00000559631 174 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 BRDTP1-201ENST00000605735 677 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 AC083843.3-201ENST00000623679 2186 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.67
CXXC1Q9P0U4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
CXXC1Q9P0U4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
CXXC1Q9P0U4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
CXXC1Q9P0U4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CXXC1Q9P0U4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 Y_RNA.269-201ENST00000364685 89 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 RNU6-21P-201ENST00000384710 107 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 RNA5SP213-201ENST00000391031 106 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 BPY2DP-201ENST00000422208 265 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 NDUFB4P10-201ENST00000452541 359 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AL136097.1-201ENST00000456945 913 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 PPIAP15-201ENST00000479662 484 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AC026403.1-201ENST00000518938 295 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AL391261.3-201ENST00000557194 520 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 MIR3609-201ENST00000582661 80 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AL160290.3-201ENST00000604869 165 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AL359198.2-201ENST00000611836 194 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AL354798.1-201ENST00000622505 329 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 MIR3199-2-201ENST00000636243 86 ntBASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.58□□□□□ -1.68
CXXC1Q9P0U4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 Y_RNA.274-201ENST00000364714 101 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 MIR10B-201ENST00000385011 110 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 AC244670.1-201ENST00000436879 112 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 HSPE1P25-201ENST00000455484 251 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 RNA5SP246-201ENST00000458909 119 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 RNU6-58P-201ENST00000517143 103 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 MIR7151-201ENST00000617477 60 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 DHX9P1-201ENST00000436565 3076 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 MAPK10-320ENST00000641462 6696 ntBASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXXC1Q9P0U4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RNU6-270P-201ENST00000364131 105 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RNA5SP72-201ENST00000364442 117 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RNA5SP151-201ENST00000365632 117 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RNU6-159P-201ENST00000391080 106 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RNA5SP390-201ENST00000410191 113 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AL358075.3-201ENST00000426289 226 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 RPL39P29-201ENST00000447779 157 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AC006199.1-201ENST00000548728 219 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AC091178.1-203ENST00000584586 279 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AC048347.1-201ENST00000624621 427 ntBASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.56□□□□□ -1.68
CXXC1Q9P0U4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 RNU5F-3P-201ENST00000363767 117 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 RNU6-487P-201ENST00000365430 104 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 RNU6-281P-201ENST00000384212 103 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 MIR1298-201ENST00000408783 112 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 RNU6-1001P-201ENST00000411265 100 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 AL390729.2-201ENST00000416137 156 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 RPL23AP82-202ENST00000427528 469 ntBASIC4.55□□□□□ -1.68
CXXC1Q9P0U4 AC005300.1-201ENST00000428401 373 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms