Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 AL691447.3-201ENST00000635020 330 ntBASIC3.2□□□□□ -1.9
NRIP3Q9NQ35 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
NRIP3Q9NQ35 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NRIP3Q9NQ35 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NRIP3Q9NQ35 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.2□□□□□ -1.9
NRIP3Q9NQ35 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.210-201ENST00000364161 110 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RNU6-741P-201ENST00000383889 107 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RNU6-325P-201ENST00000411132 105 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AL030996.1-201ENST00000411430 235 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AL592148.1-201ENST00000413568 445 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RPS15AP10-201ENST00000432472 382 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC011816.1-201ENST00000441346 546 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC114801.2-201ENST00000503825 781 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RNU6-1256P-201ENST00000516539 103 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 HIGD1AP5-201ENST00000529959 259 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 SUB1P3-201ENST00000564581 315 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AMZ2P1-203ENST00000565833 850 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 MIR5188-201ENST00000583467 113 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 MIR548AC-201ENST00000585049 88 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC098826.3-201ENST00000603823 466 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC004852.3-201ENST00000614131 326 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC034102.8-201ENST00000615146 484 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 U2.1-201ENST00000618978 145 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
NRIP3Q9NQ35 AC010680.1-201ENST00000590024 3590 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RN7SKP227-201ENST00000364445 330 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.324-201ENST00000365165 102 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.480-201ENST00000384364 102 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RNU6-1179P-201ENST00000384667 107 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RPL21P1-201ENST00000399532 476 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 DYNLT3P2-201ENST00000442517 295 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RPS3AP46-201ENST00000448352 682 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AL031274.1-201ENST00000450334 232 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AC104564.1-201ENST00000493028 407 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RPL22P13-201ENST00000493291 347 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 MTND1P19-201ENST00000511780 315 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RNU6-927P-201ENST00000516199 100 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 ATP5F1P5-201ENST00000526403 760 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 GNAI2P1-201ENST00000541815 315 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 AL512643.1-201ENST00000635735 524 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 MFSD8-233ENST00000641482 4860 ntBASIC3.18□□□□□ -1.9
NRIP3Q9NQ35 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 RNU4-42P-201ENST00000364738 142 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.314-201ENST00000365114 102 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 RNU6-1035P-201ENST00000384477 107 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 MT-TW-201ENST00000387382 68 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.618-201ENST00000410949 107 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AP000907.1-201ENST00000428428 510 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC004975.1-201ENST00000428733 208 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 MYL8P-204ENST00000431574 518 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 PCMTD1P1-201ENST00000455560 355 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms