Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 HMGN2P7-201ENST00000456186 273 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 RPL30P1-201ENST00000488676 339 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 RNU6-406P-201ENST00000516470 107 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 H3F3AP1-201ENST00000559984 334 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 MTND6P33-201ENST00000571794 183 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 AC024153.1-201ENST00000603103 365 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 RPL23AP88-201ENST00000605759 454 ntBASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.8□□□□□ -1.64
VTI1AQ96AJ9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC090740.1-201ENST00000623193 2262 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6-942P-201ENST00000363002 107 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6-527P-201ENST00000363425 104 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6-17P-201ENST00000384245 107 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6-18P-201ENST00000384527 107 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AP000907.1-201ENST00000428428 510 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC007389.2-201ENST00000434630 306 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AL031659.1-201ENST00000447075 539 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 snoU13.22-201ENST00000459428 104 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC006499.6-201ENST00000511169 607 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC091874.1-201ENST00000511402 339 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC099522.1-202ENST00000514718 367 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 RNU6-496P-201ENST00000516145 99 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 BRDTP1-201ENST00000605735 677 ntBASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.79□□□□□ -1.64
VTI1AQ96AJ9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 RNU1-15P-201ENST00000353977 144 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 Y_RNA.200-201ENST00000364018 102 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 RNU6-898P-201ENST00000365627 104 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 GOT2P5-201ENST00000433995 546 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 HMGN2P16-201ENST00000456802 261 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 AL136097.1-201ENST00000456945 913 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 RPL23AP49-201ENST00000492925 468 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 VWA8P1-201ENST00000510889 176 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 AP004607.1-201ENST00000524456 203 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 MIR4444-1-201ENST00000581696 74 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 MIR4444-2-201ENST00000584390 74 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 MIR6075-201ENST00000620782 95 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 U2.21-201ENST00000637295 81 ntBASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTI1AQ96AJ9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 RNU1-35P-201ENST00000362782 153 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 RNU6-318P-201ENST00000384283 103 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 RNU6-658P-201ENST00000384606 106 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 MIR493-201ENST00000385254 89 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AC098831.1-201ENST00000440661 216 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AC243964.1-201ENST00000441814 261 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AL353705.4-201ENST00000449661 238 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AF186996.7-201ENST00000492781 209 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AL592156.1-201ENST00000508758 304 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 PPBPP1-201ENST00000510807 373 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 RNU1-103P-201ENST00000516502 125 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 U2.22-201ENST00000636441 106 ntBASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTI1AQ96AJ9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 Y_RNA.270-201ENST00000364693 104 ntBASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 RNU6-926P-201ENST00000384075 107 ntBASIC4.76□□□□□ -1.65
VTI1AQ96AJ9 MIR3074-201ENST00000384885 81 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms