Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC010095.1-201ENST00000443543 144 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AL121914.1-201ENST00000450188 156 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 RPS27P1-201ENST00000450552 247 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 IFNWP4-201ENST00000453148 294 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 SCARNA8-201ENST00000515924 131 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AC018448.1-201ENST00000552843 316 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 MIR5688-201ENST00000580619 83 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AL391813.1-201ENST00000603098 260 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AC106754.2-201ENST00000623006 233 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 SCARNA4-202ENST00000625402 129 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 MIR492-201ENST00000638676 116 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 MIR450A1-201ENST00000362262 91 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 Z98745.1-201ENST00000402553 494 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-588P-201ENST00000410281 105 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-712P-201ENST00000410558 100 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 UQCRHP4-201ENST00000471686 272 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC105137.1-201ENST00000484355 562 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC139453.3-201ENST00000493276 369 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 RNU2-60P-201ENST00000517290 128 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC136628.3-201ENST00000521868 290 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 TRAV8-5-201ENST00000537369 341 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 MIR3944-201ENST00000581277 108 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 RN7SL435P-201ENST00000584418 282 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC010999.1-201ENST00000611856 324 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AL391261.4-201ENST00000616012 481 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC027309.3-201ENST00000623419 351 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 AC125257.1-201ENST00000560400 2930 ntBASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-3Q8TAU0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 ZNF702P-202ENST00000434269 1966 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-801P-201ENST00000364087 105 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.280-201ENST00000364765 112 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-356P-201ENST00000384140 107 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RNU1-13P-201ENST00000384499 162 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 U3.19-201ENST00000390893 196 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 SNORA75.5-201ENST00000391291 81 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AL353748.1-201ENST00000440753 474 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AL589765.3-201ENST00000446084 462 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RPL31P13-201ENST00000484151 370 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-453P-201ENST00000516819 85 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP143-201ENST00000516936 115 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 IGLVIV-65-201ENST00000517313 360 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AP003730.1-201ENST00000524605 285 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AC024220.1-201ENST00000603675 484 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AL356157.2-201ENST00000605122 111 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AC091932.3-201ENST00000624223 323 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 AL136164.3-201ENST00000624429 3978 ntBASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-3Q8TAU0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AL031595.2-201ENST00000624215 19071 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-525P-201ENST00000363685 104 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.498-201ENST00000384460 102 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.558-201ENST00000384685 113 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 MIR153-1-201ENST00000384914 90 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 MIR15B-201ENST00000385045 98 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 MIR548A3-201ENST00000385297 97 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP372-201ENST00000390836 115 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 PPIAP31-201ENST00000405422 495 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AC009963.1-201ENST00000417265 157 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 RPL21P66-201ENST00000426566 466 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 HSPE1P6-201ENST00000479457 291 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-1007P-201ENST00000516586 107 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 SNORA31.19-201ENST00000517079 126 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AC233702.9-201ENST00000581528 203 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms