Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-1272P-201ENST00000362776 107 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.215-201ENST00000364204 112 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.261-201ENST00000364631 102 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 Z98745.1-201ENST00000402553 494 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 RPL21P65-201ENST00000406094 466 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AC019205.3-201ENST00000424573 156 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 ABCF2P2-201ENST00000450549 296 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 RPS27AP9-201ENST00000477681 438 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-426P-201ENST00000516464 97 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-919P-201ENST00000516731 104 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AC026403.1-201ENST00000518938 295 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 IFITM8P-201ENST00000522529 394 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AL121772.2-201ENST00000614331 297 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AC022336.2-201ENST00000568966 2538 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RNU4-17P-201ENST00000365598 141 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 MIR549A-201ENST00000385268 96 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RNU1-82P-201ENST00000390851 165 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-257P-201ENST00000410238 98 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RPS26P42-201ENST00000413485 326 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 AL645608.4-201ENST00000423619 154 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 SEPT7P4-201ENST00000437076 306 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RPS27P26-201ENST00000494583 239 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 CKS1BP7-201ENST00000522230 235 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 MUC2-202ENST00000613187 4845 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 ADAM3A-203ENST00000461344 2157 ntBASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PRPF38BQ5VTL8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-50P-201ENST00000362356 103 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.23-201ENST00000362496 106 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.412-201ENST00000384001 104 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 RNA5SP475-201ENST00000410568 110 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 HMGB1P37-201ENST00000439613 609 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AC022795.1-201ENST00000473808 480 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 NACAP3-201ENST00000552100 481 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 RN7SL600P-201ENST00000581811 299 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AL022401.1-201ENST00000619498 108 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 AC007496.3-201ENST00000624987 3443 ntBASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF38BQ5VTL8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AC021146.4-201ENST00000309229 279 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-727P-201ENST00000363592 107 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-151P-201ENST00000364158 107 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RNA5SP187-201ENST00000384400 119 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MIR659-201ENST00000384963 97 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AL357075.1-201ENST00000404107 726 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MIR320B2-201ENST00000408479 138 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms