Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SNORA70.19-201ENST00000516717 90 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 RNU6-264P-201ENST00000517134 104 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC011602.1-201ENST00000546484 331 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 SYF2P1-201ENST00000550658 413 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 TRAV32-201ENST00000553993 340 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 MIR4276-201ENST00000584832 70 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AL121917.1-203ENST00000605534 577 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC004852.3-201ENST00000614131 326 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A4P31645 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A4P31645 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A4P31645 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SLC6A4P31645 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SLC6A4P31645 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A4P31645 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A4P31645 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 SNORA63C-201ENST00000364578 129 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 SNORA1.3-201ENST00000384676 136 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RNA5SP120-201ENST00000410900 112 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RNU6-325P-201ENST00000411132 105 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC093151.1-201ENST00000427711 313 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RPL23AP50-201ENST00000434149 455 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A4P31645 BX510359.1-201ENST00000456973 237 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RPS4XP2-201ENST00000458402 793 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RN7SL807P-201ENST00000470923 297 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A4P31645 RN7SKP57-201ENST00000517248 293 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 RN7SKP295-201ENST00000517264 153 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC109446.1-201ENST00000566172 220 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 CPDP1-201ENST00000579660 283 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC083806.3-201ENST00000614016 455 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AL161629.2-201ENST00000615347 275 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A4P31645 U2.21-201ENST00000637295 81 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SLC6A4P31645 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 AC066616.2-201ENST00000559334 1481 ntBASIC3.47□□□□□ -1.85
SLC6A4P31645 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A4P31645 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.46□□□□□ -1.85
SLC6A4P31645 PWAR6-201ENST00000552334 4618 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC6A4P31645 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SLC6A4P31645 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 TNPO1P3-201ENST00000436471 2662 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 Y_RNA.216-201ENST00000364205 93 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 RNU5E-7P-201ENST00000365290 117 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 Y_RNA.463-201ENST00000384271 102 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 RNU6-1035P-201ENST00000384477 107 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AL513475.1-201ENST00000406602 315 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AL117339.3-201ENST00000418733 162 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AC011816.1-201ENST00000441346 546 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AC013470.1-201ENST00000453438 462 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 HMGN1P10-201ENST00000474557 553 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.46□□□□□ -1.86
SLC6A4P31645 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
SLC6A4P31645 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A4P31645 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A4P31645 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SLC6A4P31645 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC6A4P31645 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SLC6A4P31645 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A4P31645 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SLC6A4P31645 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SLC6A4P31645 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SLC6A4P31645 ZNF807-201ENST00000328088 1707 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A4P31645 RPL9P7-201ENST00000330965 580 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 Y_RNA.5-201ENST00000362334 102 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 Y_RNA.31-201ENST00000362574 102 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 SNORD6-201ENST00000365444 73 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 RNU6-827P-201ENST00000365553 106 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 RNU6-842P-201ENST00000384269 107 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 Y_RNA.473-201ENST00000384333 102 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A4P31645 RNU6-174P-201ENST00000410406 106 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 RNU6-55P-201ENST00000411092 107 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 NDUFS5P4-201ENST00000412983 318 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms